Pseudomonas aeruginosa UCBPP-PA14, PA14_58490 (dppF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042938 dipeptide transport
IGI
Inferred from Genetic Interaction 		ECO:0000012
functional complementation evidence		 25338022 Reviewed by curator
Molecular Function GO:0042277 peptide binding
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 25338022 Reviewed by curator
Biological Process GO:0015833 peptide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01727
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01727
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01727
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 234 298 7.3E-19
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 1 322 2.1E-119
CDD cd03257 ABC_NikE_OppD_transporters - - 4 236 1.35167E-116
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 39 231 7.8E-18
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 321 2.2E-97
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 5 253 4.71E-72
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 30 182 1.7E-35
NCBIfam TIGR01727 JCVI: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 234 316 1.3E-25
PANTHER PTHR43776 TRANSPORT ATP-BINDING PROTEIN - - 2 317 1.5E-113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.