Pseudomonas aeruginosa PAO1, PA1266.1 (lhpF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA1266.1
Name
lhpF
Replicon chromosome
Genomic location 1376094 - 1376330 (- strand)

Cross-References

RefSeq
GI

Product

Feature Type CDS
Coding Frame 1
Product Name
D-hydroxyproline dehydrogenase gamma-subunit, LphF
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 4.80
Kyte-Doolittle Hydrophobicity Value 0.162
Molecular Weight (kDa) 8.2
Isoelectric Point (pI) 8.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1266.1
Search term: lhpF

Human Homologs

References

Molecular characterization of LhpR in control of hydroxyproline catabolism and transport in Pseudomonas aeruginosa PAO1.
Li G, Lu CD
Microbiology (Reading) 2016 Jul;162(7):1232-1242
PubMed ID: 27145750
Identification and characterization of D-hydroxyproline dehydrogenase and Delta1-pyrroline-4-hydroxy-2-carboxylate deaminase involved in novel L-hydroxyproline metabolism of bacteria: metabolic convergent evolution.
Watanabe S, Morimoto D, Fukumori F, Shinomiya H, Nishiwaki H, Kawano-Kawada M, Sasai Y, Tozawa Y, Watanabe Y
J Biol Chem 2012 Sep 21;287(39):32674-88
PubMed ID: 22833679