Pseudomonas putida KT2440, PP_0655 (hcp4)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other KT2440 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05638 Type VI secretion system effector, Hcp IPR008514 Type VI secretion system effector Hcp 28 106 5.6E-19
Gene3D G3DSA:2.30.110.20 - IPR036624 Hcp1-like superfamily 21 107 4.1E-23
PANTHER PTHR36152 CYTOPLASMIC PROTEIN-RELATED - - 23 105 9.2E-14
SUPERFAMILY SSF141452 Hcp1-like IPR036624 Hcp1-like superfamily 24 106 4.71E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.