Pseudomonas putida KT2440, PP_3090 (tagP1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other KT2440 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppu02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppu03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 765 781 1.1E-6
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 716 807 3.3E-14
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 719 741 1.1E-6
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 715 827 2.18957E-26
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 750 765 1.1E-6
Pfam PF06761 Intracellular multiplication and human macrophage-killing IPR009612 IcmF-related 498 697 1.1E-16
NCBIfam TIGR03348 JCVI: type VI secretion system membrane subunit TssM IPR017731 Type VI secretion system protein TssM1-like 18 559 2.4E-128
PANTHER PTHR36153 INNER MEMBRANE PROTEIN-RELATED - - 14 702 4.1E-110
Pfam PF14331 IcmF-related N-terminal domain IPR025743 IcmF-related, N-terminal domain 189 446 5.6E-75
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 698 830 3.2E-31
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 124 271 2.15E-9
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 118 285 2.1E-6
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 707 827 1.96E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.