Pseudomonas putida KT2440, PP_4049 (vgrG5)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other KT2440 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppu03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	20	523	4.4E-127
PANTHER	PTHR32305	-	-	-	23	590	8.6E-94
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	9	540	0.0
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	15	182	1.4E-49
Gene3D	G3DSA:4.10.220.110	-	-	-	241	304	1.1E-76
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	28	347	8.7E-64
Gene3D	G3DSA:3.55.50.10	-	-	-	96	195	1.1E-76
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	406	473	6.2E-12
Gene3D	G3DSA:2.30.110.50	-	-	-	21	347	1.1E-76
Pfam	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)	IPR018769	Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345	582	666	2.7E-12
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	384	471	4.18E-31
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	462	658	1.18E-46
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	214	385	2.89E-27
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	378	476	5.7E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.