Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006402 | mRNA catabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00202
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006109 | regulation of carbohydrate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00202
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00202
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | ppu02020 | Two-component system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppu02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR00202 | JCVI: carbon storage regulator CsrA | IPR003751 | Translational regulator CsrA | 1 | 58 | 2.4E-25 |
Hamap | MF_00167 | Translational regulator CsrA [csrA]. | IPR003751 | Translational regulator CsrA | 1 | 62 | 16.492058 |
SUPERFAMILY | SSF117130 | CsrA-like | IPR036107 | Carbon storage regulator superfamily | 1 | 55 | 1.26E-17 |
Pfam | PF02599 | Global regulator protein family | IPR003751 | Translational regulator CsrA | 1 | 53 | 5.7E-24 |
Gene3D | G3DSA:2.60.40.4380 | Translational regulator CsrA | IPR036107 | Carbon storage regulator superfamily | 1 | 61 | 1.4E-24 |
PANTHER | PTHR34984 | CARBON STORAGE REGULATOR | IPR003751 | Translational regulator CsrA | 1 | 59 | 9.4E-22 |
FunFam | G3DSA:2.60.40.4380:FF:000001 | Translational regulator CsrA | - | - | 1 | 61 | 1.1E-33 |