Pseudomonas putida KT2440, PP_4886 (hcp5)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida KT2440 (TIGR)
GCF_000007565.2|latest
Locus Tag
PP_4886
Name
hcp5
Replicon chromosome
Genomic location 5554350 - 5554895 (- strand)
CommentPart of the KT2440 Orphan Hcp5 cluster

Cross-References

RefSeq NP_746989.1
GI 26991564

Product

Feature Type CDS
Coding Frame 1
Product Name
Hcp5
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 2.61
Kyte-Doolittle Hydrophobicity Value -0.294
Molecular Weight (kDa) 19.8
Isoelectric Point (pI) 8.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 2
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP_4886
Search term: hcp5
Search term: Hcp5

Human Homologs

References

The Pseudomonas putida T6SS is a plant warden against phytopathogens.
Bernal P, Allsopp LP, Filloux A, Llamas MA
ISME J 2017 Apr;11(4):972-987
PubMed ID: 28045455