Pseudomonas aeruginosa PAO1, PA0042

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0042
Name
Replicon chromosome
Genomic location 56546 - 56941 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248732.1
GI 15595240
Affymetrix PA0042_at
DNASU PaCD00006020
Entrez 878502
GenBank AAG03432.1
INSDC AAG03432.1
NCBI Locus Tag PA0042
protein_id(GenBank) gb|AAG03432.1|AE004444_1|gnl|PseudoCAP|PA0042
TIGR NTL03PA00043
UniParc UPI00000C4EFC
UniProtKB Acc Q9I790
UniProtKB ID Q9I790_PSEAE
UniRef100 UniRef100_Q9I790
UniRef50 UniRef50_Q9I790
UniRef90 UniRef90_Q9I790

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Charge (pH 7) -1.63
Kyte-Doolittle Hydrophobicity Value -0.443
Molecular Weight (kDa) 14.6
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000042 (305 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0042

Transposon Insertions in PAO1

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_00530
Mutant ID PA14NR: 32318
Genomic Position 55098
Position in ORF 190(396)
Reference 16477005

References

No references are associated with this feature.