Pseudomonas aeruginosa PAO1, PA0047

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0047
Name
Replicon chromosome
Genomic location 61879 - 62388 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_248737.1
GI 15595245
Affymetrix PA0047_at
DNASU PaCD00006021
Entrez 877928
GenBank AAG03437.1
INSDC AAG03437.1
NCBI Locus Tag PA0047
protein_id(GenBank) gb|AAG03437.1|AE004444_6|gnl|PseudoCAP|PA0047
TIGR NTL03PA00048
UniParc UPI00000C4F01
UniProtKB Acc Q9I785
UniProtKB ID Q9I785_PSEAE
UniRef100 UniRef100_Q9I785
UniRef50 UniRef50_Q9I785
UniRef90 UniRef90_Q9I785

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -1.78
Kyte-Doolittle Hydrophobicity Value 0.085
Molecular Weight (kDa) 17.5
Isoelectric Point (pI) 5.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 50 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000047 (393 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0047

Transposon Insertions in PAO1

Type ISphoA/hah insertion site
Mutant ID UWGC: 40594
Genomic Position 62061
Position in ORF 183(510)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 31992
Genomic Position 61885
Position in ORF 7(510)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.