Pseudomonas aeruginosa PAO1, PA0142

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0142
Name
Replicon chromosome
Genomic location 161906 - 163255 (+ strand)
Transposon Mutants 4 transposon mutants in PAO1

Cross-References

RefSeq NP_248832.1
GI 15595340
Affymetrix PA0142_at
Entrez 879447
GenBank AAG03532.1
INSDC AAG03532.1
NCBI Locus Tag PA0142
protein_id(GenBank) gb|AAG03532.1|AE004452_4|gnl|PseudoCAP|PA0142
TIGR NTL03PA00143
UniParc UPI00000C4F5E
UniProtKB Acc Q9I6Z0
UniProtKB ID OXODE_PSEAE
UniRef100 UniRef100_Q9I6Z0
UniRef50 UniRef50_Q9I6Z0
UniRef90 UniRef90_Q9I6Z0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.62
Kyte-Doolittle Hydrophobicity Value 0.017
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 6.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 458 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000140 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0142

Transposon Insertions in PAO1

Type ISphoA/hah insertion site
Mutant ID UWGC: 32365
Genomic Position 162497
Position in ORF 592(1350)
Reference 14617778
Type mini-Tn5 lux transposon insertion site (Non-transcriptional fusion)
Mutant ID UBC: PAO1_lux_16_F12
Genomic Position 162418
Position in ORF 513(1350)
Reference 15805499
Type Confirmed ISphoA/hah insertion site
Mutant ID UWGC: 40972
Genomic Position 162965
Position in ORF 1060(1350)
Reference 14617778
Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 115
Genomic Position 162113
Position in ORF 208(1350)
Reference 14617778

Transposon Insertions in Orthologs

References

The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway.
Boundy-Mills KL, de Souza ML, Mandelbaum RT, Wackett LP, Sadowsky MJ.
Appl Environ Microbiol. 1997 Mar;63(3):916-23.
PubMed ID: 9055410