Pseudomonas aeruginosa PAO1, PA0171

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0171
Name
Replicon chromosome
Genomic location 194206 - 194748 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248861.1
GI 15595369
Affymetrix PA0171_at
Entrez 882156
GenBank AAG03561.1
INSDC AAG03561.1
NCBI Locus Tag PA0171
protein_id(GenBank) gb|AAG03561.1|AE004455_2|gnl|PseudoCAP|PA0171
TIGR NTL03PA00172
UniParc UPI00000C4F7A
UniProtKB Acc Q9I6W1
UniProtKB ID Q9I6W1_PSEAE
UniRef100 UniRef100_W0YK48
UniRef50 UniRef50_A0A052I5K0
UniRef90 UniRef90_A6UXW2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 0.13
Kyte-Doolittle Hydrophobicity Value -0.254
Molecular Weight (kDa) 19.8
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 51 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000169 (335 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0171

Transposon Insertions in PAO1

Type ISphoA/hah insertion site
Mutant ID UWGC: 52252
Genomic Position 194438
Position in ORF 233(543)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 40585
Genomic Position 194652
Position in ORF 447(543)
Reference 14617778

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_02140
Mutant ID PA14NR: 39659
Genomic Position 193507
Position in ORF 442(543)
Reference 16477005

References

Identification of two new genes involved in twitching motility in Pseudomonas aeruginosa.
Shan Z, Xu H, Shi X, Yu Y, Yao H, Zhang X, Bai Y, Gao C, Saris PE, Qiao M.
Microbiology. 2004 Aug;150(Pt 8):2653-61.
PubMed ID: 15289561
Autolysis and autoaggregation in Pseudomonas aeruginosa colony morphology mutants.
D'Argenio DA, Calfee MW, Rainey PB, Pesci EC.
J Bacteriol. 2002 Dec;184(23):6481-9.
PubMed ID: 12426335