Pseudomonas aeruginosa PAO1, PA0189

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0189
Name
Synonym: opdI
Replicon chromosome
Genomic location 215550 - 216908 (- strand)
Transposon Mutants 4 transposon mutants in PAO1

Cross-References

RefSeq NP_248879.1
GI 15595387
Affymetrix PA0189_at
Entrez 883120
GenBank AAG03579.1
INSDC AAG03579.1
NCBI Locus Tag PA0189
protein_id(GenBank) gb|AAG03579.1|AE004456_10|gnl|PseudoCAP|PA0189
TIGR NTL03PA00190
UniParc UPI00000C4F89
UniProtKB Acc Q9I6U5
UniProtKB ID Q9I6U5_PSEAE
UniRef100 UniRef100_Q9I6U5
UniRef50 UniRef50_Q9I6U5
UniRef90 UniRef90_Q9I6U5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable porin
Product Name Confidence: Class 3
Evidence for Translation
Charge (pH 7) 6.65
Kyte-Doolittle Hydrophobicity Value -0.453
Molecular Weight (kDa) 48.9
Isoelectric Point (pI) 9.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000187 (1633 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0189
Search term: probable porin

Transposon Insertions in PAO1

Type mini-Tn5 lux transposon insertion site (Non-transcriptional fusion)
Mutant ID UBC: PAO1_lux_51_A1
Genomic Position 216406
Position in ORF 857(1359)
Reference 15805499
Type mini-Tn5 lux transposon insertion site (Transcriptional fusion)
Mutant ID UBC: PAO1_lux_26_E12
Genomic Position 215823
Position in ORF 274(1359)
Reference 15805499
Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 4813
Genomic Position 215843
Position in ORF 294(1359)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 50618
Genomic Position 215815
Position in ORF 266(1359)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.