Pseudomonas aeruginosa PAO1, PA0217

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0217
Name
Synonym: mdcR
Replicon chromosome
Genomic location 244690 - 245619 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_248908.1
GI 15595414
Affymetrix PA0217_at
Entrez 883005
GenBank AAG03606.1
INSDC AAG03606.1
NCBI Locus Tag PA0217
protein_id(GenBank) gb|AAG03606.1|AE004459_10|gnl|PseudoCAP|PA0217
TIGR NTL03PA00218
UniParc UPI00000C4FA0
UniProtKB Acc Q9I6S1
UniProtKB ID Q9I6S1_PSEAE
UniRef100 UniRef100_W0YL64
UniRef50 UniRef50_Q4K4G4
UniRef90 UniRef90_A6UY12

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Evidence for Translation
Charge (pH 7) -3.40
Kyte-Doolittle Hydrophobicity Value 0.041
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 438 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000216 (505 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0217

Transposon Insertions in PAO1

Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 2307
Genomic Position 244933
Position in ORF 244(930)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 54948
Genomic Position 245423
Position in ORF 734(930)
Reference 14617778

Transposon Insertions in Orthologs

References

Sequence of a gene cluster from Klebsiella pneumoniae encoding malonate decarboxylase and expression of the enzyme in Escherichia coli.
Hoenke S, Schmid M, Dimroth P.
Eur J Biochem. 1997 Jun 1;246(2):530-8.
PubMed ID: 9208947