Pseudomonas aeruginosa PAO1, PA0542

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0542
Name
Synonym: yqjC
Replicon chromosome
Genomic location 599757 - 600176 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_249233.1
GI 15595739
Affymetrix PA0542_at
DNASU PaCD00006234
Entrez 879311
GenBank AAG03931.1
INSDC AAG03931.1
NCBI Locus Tag PA0542
protein_id(GenBank) gb|AAG03931.1|AE004490_11|gnl|PseudoCAP|PA0542
TIGR NTL03PA00543
UniParc UPI00000C50A6
UniProtKB Acc Q9I5Z4
UniProtKB ID Q9I5Z4_PSEAE
UniRef100 UniRef100_Q9I5Z4
UniRef50 UniRef50_W0YM34
UniRef90 UniRef90_W0YM34

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.18
Kyte-Doolittle Hydrophobicity Value -0.500
Molecular Weight (kDa) 14.8
Isoelectric Point (pI) 8.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000526 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0542

References

No references are associated with this feature.