Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0792
|
Name |
prpD
|
Replicon | chromosome |
Genomic location | 867324 - 868808 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_249483.1 |
GI | 15595989 |
Affymetrix | PA0792_prpD_at |
Entrez | 881990 |
GenBank | AAG04181.1 |
INSDC | AAG04181.1 |
NCBI Locus Tag | PA0792 |
protein_id(GenBank) | gb|AAG04181.1|AE004514_4|gnl|PseudoCAP|PA0792 |
TIGR | NTL03PA00793 |
UniParc | UPI00000C5155 |
UniProtKB Acc | Q9I5E6 |
UniProtKB ID | Q9I5E6_PSEAE |
UniRef100 | UniRef100_Q9I5E6 |
UniRef50 | UniRef50_P77243 |
UniRef90 | UniRef90_A6VAI3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
propionate catabolic protein PrpD
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -3.90 |
Kyte-Doolittle Hydrophobicity Value | -0.140 |
Molecular Weight (kDa) | 54.9 |
Isoelectric Point (pI) | 6.60 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6S62 | ISOMERASE | 07/02/19 | Crystal structure of 2-methylcitrate dehydratase (PrpD) from Pseudomonas aeruginosa in apo form. | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.36 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000765 (441 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0792
Search term: prpD
Search term: propionate catabolic protein PrpD
|
Propionate catabolism in Salmonella typhimurium LT2: two divergently transcribed units comprise the prp locus at 8.5 centisomes, prpR encodes a member of the sigma-54 family of activators, and the prpBCDE genes constitute an operon.
Horswill AR, Escalante-Semerena JC
J Bacteriol 1997 Feb;179(3):928-40
PubMed ID: 9006051
|