Pseudomonas aeruginosa PAO1, PA0826.1

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0826.1
Name
Replicon chromosome
Genomic location 901746 - 901778 (- strand)

Cross-References

RefSeq
GI 308198345
TIGR NTPA03_tRNA-Pseudo-1

Product

Feature Type CDS
Coding Frame 1
Product Name
translated portion of tmRNA gene ssrA
Product Name Confidence: Class 2
Evidence for Translation
Charge (pH 7) -2.02
Kyte-Doolittle Hydrophobicity Value -0.430
Molecular Weight (kDa) 1037.0
Isoelectric Point (pI) 3.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG008393 (1 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0826.1

References

Phylogenetic analysis of tmRNA secondary structure.
Williams KP, Bartel DP
RNA 1996 Dec;2(12):1306-10
PubMed ID: 8972778