Pseudomonas aeruginosa UCBPP-PA14, PA14_00450 (trpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00450
Name
trpB
Replicon chromosome
Genomic location 37911 - 39119 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_788192.1
GI 116053757
EC Number 4.2.1.20
Entrez 4384755
INSDC ABJ14993.1
NCBI Locus Tag PA14_00450
UniParc UPI000045D36F
UniProtKB Acc Q02V44
UniProtKB ID Q02V44_PSEAB
UniRef100 UniRef100_Q02V44
UniRef50 UniRef50_P07345
UniRef90 UniRef90_P07345

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit beta
Evidence for Translation
Charge (pH 7) -6.09
Kyte-Doolittle Hydrophobicity Value -0.202
Molecular Weight (kDa) 43.7
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000036 (574 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00450
Search term: trpB

Transposon Insertions in UCBPP-PA14

Type MAR2xT7 transposon (wild type background) insertion site
Mutant ID PA14NR: 43694
Genomic Position 38950
Position in ORF 1040(1209)
Reference 16477005

Transposon Insertions in Orthologs

Type Confirmed ISlacZ/hah insertion site
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0036
Mutant ID UWGC: 9255
Genomic Position 38846
Position in ORF 957(1209)
Reference 14617778
Type ISphoA/hah insertion site
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0036
Mutant ID UWGC: 30248
Genomic Position 38525
Position in ORF 636(1209)
Reference 14617778
Type ISphoA/hah insertion site
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0036
Mutant ID UWGC: 32971
Genomic Position 37988
Position in ORF 99(1209)
Reference 14617778

References

No references are associated with this feature.