Pseudomonas aeruginosa UCBPP-PA14, PA14_01030 (hcp1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_01030
Name
hcp1
Replicon chromosome
Genomic location 101003 - 101491 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788242.1
GI 116053805
Entrez 4383503
INSDC ABJ15041.1
NCBI Locus Tag PA14_01030
UniParc UPI00000C4F26
UniProtKB Acc Q02UZ4
UniProtKB ID Q02UZ4_PSEAB
UniRef100 UniRef100_Q9I747
UniRef50 UniRef50_Q9I747
UniRef90 UniRef90_Q9I747

Product

Feature Type CDS
Coding Frame 1
Product Name
Hcp1
Product Name Confidence: Class 1
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)
Evidence for Translation
Charge (pH 7) -0.32
Kyte-Doolittle Hydrophobicity Value -0.415
Molecular Weight (kDa) 17.4
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4KSR PROTEIN TRANSPORT 05/17/13 Crystal Structure of the Vibrio cholerae ATPase GspE Hexamer VIBRIO CHOLERAE O1, PSEUDOMONAS AERUGINOSA 4.2 X-RAY DIFFRACTION 100.0
4KSS PROTEIN TRANSPORT 05/17/13 Crystal Structure of Vibrio cholerae ATPase GspsE Hexamer VIBRIO CHOLERAE O1, PSEUDOMONAS AERUGINOSA 7.58 X-RAY DIFFRACTION 100.0
1Y12 structural genomics, unknown function 11/16/04 Structure of a hemolysin-coregulated protein from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA PAO1 1.95 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 75 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000084 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_01030
Search term: hcp1
Search term: Hcp1

References

PubMed ID: 28673999