Pseudomonas aeruginosa UCBPP-PA14, PA14_02580 (mdcD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_02580
Name
mdcD
Replicon chromosome
Genomic location 230222 - 231085 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_788362.1
GI 116053924
Entrez 4383603
INSDC ABJ15160.1
NCBI Locus Tag PA14_02580
UniParc UPI00000C4F9A
UniProtKB Acc Q02UM4
UniProtKB ID Q02UM4_PSEAB
UniRef100 UniRef100_Q9I6S7
UniRef50 UniRef50_A0A085GVQ3
UniRef90 UniRef90_A6UY06

Product

Feature Type CDS
Coding Frame 1
Product Name
malonate decarboxylase subunit beta
Evidence for Translation
Charge (pH 7) -9.08
Kyte-Doolittle Hydrophobicity Value 0.041
Molecular Weight (kDa) 30.3
Isoelectric Point (pI) 4.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 556 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000210 (505 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_02580
Search term: mdcD

Transposon Insertions in UCBPP-PA14

Type MAR2xT7 transposon (wild type background) insertion site
Mutant ID PA14NR: 29777
Genomic Position 230734
Position in ORF 513(864)
Reference 16477005

Transposon Insertions in Orthologs

Type mini-Tn5 lux transposon insertion site (Non-transcriptional fusion)
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0211
Mutant ID UBC: PAO1_lux_32_D2
Genomic Position 240143
Position in ORF 73(864)
Reference 15805499
Type ISlacZ/hah insertion site
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0211
Mutant ID UWGC: 3154
Genomic Position 240329
Position in ORF 259(864)
Reference 14617778
Type ISphoA/hah insertion site
Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag PA0211
Mutant ID UWGC: 46646
Genomic Position 240622
Position in ORF 552(864)
Reference 14617778

References

No references are associated with this feature.