Pseudomonas aeruginosa UCBPP-PA14, PA14_04310 (rpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_04310
Name
rpiA
Replicon chromosome
Genomic location 385330 - 386001 (- strand)

Cross-References

RefSeq YP_788500.1
GI 116054057
EC Number 5.3.1.6
Entrez 4383735
INSDC ABJ15293.1
NCBI Locus Tag PA14_04310
UniParc UPI00000C500D
UniProtKB Acc Q02U86
UniProtKB ID RPIA_PSEAB
UniRef100 UniRef100_B7V2P3
UniRef50 UniRef50_Q8PH49
UniRef90 UniRef90_B7V2P3

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose-5-phosphate isomerase A
Synonyms
Evidence for Translation
Charge (pH 7) -5.59
Kyte-Doolittle Hydrophobicity Value 0.137
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4X84 ISOMERASE 12/10/14 Crystal structure of Ribose-5-phosphate isomerase A from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.25 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 374 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000322 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_04310
Search term: rpiA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribose 5-phosphate isomerase A [Source:HGNC Symbol;Acc:HGNC:10297]
E-value: 5.4e-22
Percent Identity: 34.8

References

No references are associated with this feature.