Pseudomonas aeruginosa UCBPP-PA14, PA14_04810 (laoC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_04810
Name
laoC
Replicon chromosome
Genomic location 424253 - 425683 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs
CommentPart of the Lao (long-chain-alcohol/aldehyde-oxidation) gene cluster (laoABC).

Cross-References

RefSeq YP_788538.1
GI 116054095
Entrez 4383754
INSDC ABJ15331.1
NCBI Locus Tag PA14_04810
UniParc UPI000045D3ED
UniProtKB Acc Q02U48
UniProtKB ID Q02U48_PSEAB
UniRef100 UniRef100_Q02U48
UniRef50 UniRef50_Q9I6C8
UniRef90 UniRef90_Q9I6C8

Product

Feature Type CDS
Coding Frame 1
Product Name
LaoC
Product Name Confidence: Class 1
Synonyms aldehyde dehydrogenase
Evidence for Translation
Charge (pH 7) 7.35
Kyte-Doolittle Hydrophobicity Value -0.097
Molecular Weight (kDa) 52.9
Isoelectric Point (pI) 9.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 592 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000357 (522 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_04810
Search term: laoC
Search term: LaoC

Human Homologs

Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9
Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 3 family member A2 [Source:HGNC Symbol;Acc:HGNC:403]
E-value: 5.4e-80
Percent Identity: 38.9

References

LaoABCR, a Novel System for Oxidation of Long-Chain Alcohols Derived from SDS and Alkane Degradation in Pseudomonas aeruginosa.
Panasia G, Philipp B
Appl Environ Microbiol 2018 Jul 1;84(13)
PubMed ID: 29678916