Pseudomonas aeruginosa UCBPP-PA14, PA14_16790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_16790
Name
Replicon chromosome
Genomic location 1436911 - 1437549 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789486.1
GI 116051675
Entrez 4381602
INSDC ABJ12911.1
NCBI Locus Tag PA14_16790
UniParc UPI0000396146
UniProtKB Acc Q02RF0
UniProtKB ID Q02RF0_PSEAB
UniRef100 UniRef100_W1MG09
UniRef50 UniRef50_A6V1B0
UniRef90 UniRef90_A6V1B0

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.68
Kyte-Doolittle Hydrophobicity Value -0.121
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
MexL MexL is a specific repressor of mexJK transcription and autoregulates its own expression. [PMID:15855505] ARO:3003710 protein homolog model Strict 415.2 99.53 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001962 (826 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_16790

Human Homologs

References

No references are associated with this feature.