Pseudomonas aeruginosa UCBPP-PA14, PA14_17700 (rpmE2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_17700
Name
rpmE2
Replicon chromosome
Genomic location 1521988 - 1522251 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789563.1
GI 116051599
Entrez 4381565
INSDC ABJ12835.1
NCBI Locus Tag PA14_17700
UniParc UPI0000132FA5
UniProtKB Acc Q02R73
UniProtKB ID RL31B_PSEAB
UniRef100 UniRef100_B7V9F6
UniRef50 UniRef50_Q7NA98
UniRef90 UniRef90_B7V9F6

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L31
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 3.18
Kyte-Doolittle Hydrophobicity Value -0.616
Molecular Weight (kDa) 9.5
Isoelectric Point (pI) 9.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 375 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002073 (927 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_17700
Search term: rpmE2

Human Homologs

References

Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR.
Owen GA, Pascoe B, Kallifidas D, Paget MS
J Bacteriol 2007 Jun;189(11):4078-86
PubMed ID: 17400736