Pseudomonas aeruginosa UCBPP-PA14, PA14_53920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_53920
Name
Replicon chromosome
Genomic location 4781552 - 4782274 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_792485.1
GI 116048715
Entrez 4381664
INSDC ABJ09951.1
NCBI Locus Tag PA14_53920
UniParc UPI00000C515A
UniProtKB Acc Q02HV1
UniProtKB ID Q02HV1_PSEAB
UniRef100 UniRef100_A0A069Q4N7
UniRef50 UniRef50_G8Q028
UniRef90 UniRef90_W0YMM0

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.65
Kyte-Doolittle Hydrophobicity Value -0.504
Molecular Weight (kDa) 27.3
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7XP1 SIGNALING PROTEIN 05/02/22 Crystal structure of PmiR from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.5 X-RAY DIFFRACTION 100.0
7XP0 SIGNALING PROTEIN 05/02/22 Crystal structure of PmiR from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.61 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 395 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000770 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_53920

Human Homologs

References

No references are associated with this feature.