Pseudomonas aeruginosa PAO1, PA0675 (vreI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0675
Name
vreI
Replicon chromosome
Genomic location 734872 - 735417 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_249366.1
GI 15595872
Affymetrix PA0675_at
DNASU PaCD00006307
Entrez 878410
GenBank AAG04064.1
INSDC AAG04064.1
NCBI Locus Tag PA0675
protein_id(GenBank) gb|AAG04064.1|AE004503_2|gnl|PseudoCAP|PA0675
TIGR NTL03PA00676
UniParc UPI00000C50F5
UniProtKB Acc Q9I5P9
UniProtKB ID Q9I5P9_PSEAE
UniRef100 UniRef100_W0Z4I8
UniRef50 UniRef50_G8QCH1
UniRef90 UniRef90_W0WM83

Product

Feature Type CDS
Coding Frame 1
Product Name
ECF sigma factor, VreI
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.373
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 8.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 113 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000654 (367 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0675
Search term: vreI

Human Homologs

References

A Novel extracytoplasmic function (ECF) sigma factor regulates virulence in Pseudomonas aeruginosa.
Llamas MA, van der Sar A, Chu BC, Sparrius M, Vogel HJ, Bitter W
PLoS Pathog 2009 Sep;5(9):e1000572
PubMed ID: 19730690