Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0852
|
Name |
cbpD
|
Replicon | chromosome |
Genomic location | 930653 - 931822 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249543.1 |
GI | 15596049 |
Affymetrix | PA0852_cpbD_at |
Entrez | 877771 |
GenBank | AAG04241.1 |
INSDC | AAG04241.1 |
NCBI Locus Tag | PA0852 |
protein_id(GenBank) | gb|AAG04241.1|AE004520_4|gnl|PseudoCAP|PA0852 |
TIGR | NTL03PA00853 |
UniParc | UPI00000C518B |
UniProtKB Acc | Q9I589 |
UniProtKB ID | CBPD_PSEAE |
UniRef100 | UniRef100_Q9I589 |
UniRef50 | UniRef50_Q9I589 |
UniRef90 | UniRef90_Q9I589 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
chitin-binding protein CbpD precursor
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -0.57 |
Kyte-Doolittle Hydrophobicity Value | -0.352 |
Molecular Weight (kDa) | 41.9 |
Isoelectric Point (pI) | 6.85 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
8C5N | OXIDOREDUCTASE | 01/09/23 | Sub-atomic resolution structure of the chitin-binding protein D (CbpD) from Pseudomonas aeruginosa | Pseudomonas aeruginosa PA14 | 0.75 | X-RAY DIFFRACTION | 100.0 |
7SQX | OXIDOREDUCTASE | 11/07/21 | Crystal Structure of Pseudomonas aeruginosa lytic polysaccharide monooxygenase CbpD | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 75 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000819 (307 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0852
Search term: cbpD
Search term: chitin-binding protein CbpD precursor
|
Secretion of elastinolytic enzymes and their propeptides by Pseudomonas aeruginosa.
Braun P, de Groot A, Bitter W, Tommassen J
J Bacteriol 1998 Jul;180(13):3467-9
PubMed ID: 9642203
|
Identification of a chitin-binding protein secreted by Pseudomonas aeruginosa.
Folders J, Tommassen J, van Loon LC, Bitter W
J Bacteriol 2000 Mar;182(5):1257-63
PubMed ID: 10671445
|
Two genes encoding an endoglucanase and a cellulose-binding protein are clustered and co-regulated by a TTA codon in Streptomyces halstedii JM8.
Garda AL, Fernández-Abalos JM, Sánchez P, Ruiz-Arribas A, Santamaría RI
Biochem J 1997 Jun 1;324 ( Pt 2)(Pt 2):403-11
PubMed ID: 9182697
|
Mep72, a metzincin protease that is preferentially secreted by biofilms of Pseudomonas aeruginosa.
Passmore IJ, Nishikawa K, Lilley KS, Bowden SD, Chung JC, Welch M
J Bacteriol 2015 Feb 15;197(4):762-73
PubMed ID: 25488299
|