Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1708
|
Name |
popB
Synonym: pepB |
Replicon | chromosome |
Genomic location | 1853665 - 1854837 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_250399.1 |
GI | 15596905 |
Affymetrix | PA1708_popB_at |
Entrez | 880867 |
GenBank | AAG05097.1 |
INSDC | AAG05097.1 |
NCBI Locus Tag | PA1708 |
protein_id(GenBank) | gb|AAG05097.1|AE004597_11|gnl|PseudoCAP|PA1708 |
TIGR | NTL03PA01709 |
UniParc | UPI00000C5456 |
UniProtKB Acc | Q9I324 |
UniProtKB ID | Q9I324_PSEAE |
UniRef100 | UniRef100_Q9I324 |
UniRef50 | UniRef50_Q9I324 |
UniRef90 | UniRef90_Q9I324 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
translocator protein PopB
|
Synonyms |
PepB |
Evidence for Translation | |
Charge (pH 7) | -2.26 |
Kyte-Doolittle Hydrophobicity Value | 0.164 |
Molecular Weight (kDa) | 40.1 |
Isoelectric Point (pI) | 5.88 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | VFDB : VF0083 |
Category | T3SS |
Evidence |
|
Host Organism | |
Notes | |
Reference | 11372029 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 7 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003681 (315 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1708
Search term: popB
Search term: translocator protein PopB
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
YopB and YopD constitute a novel class of Yersinia Yop proteins.
Håkansson S, Bergman T, Vanooteghem JC, Cornelis G, Wolf-Watz H
Infect Immun 1993 Jan;61(1):71-80
PubMed ID: 8418066
|
Identification of type III secreted products of the Pseudomonas aeruginosa exoenzyme S regulon.
Yahr TL, Mende-Mueller LM, Friese MB, Frank DW
J Bacteriol 1997 Nov;179(22):7165-8
PubMed ID: 9371466
|
Functional conservation of the effector protein translocators PopB/YopB and PopD/YopD of Pseudomonas aeruginosa and Yersinia pseudotuberculosis.
Frithz-Lindsten E, Holmström A, Jacobsson L, Soltani M, Olsson J, Rosqvist R, Forsberg A
Mol Microbiol 1998 Sep;29(5):1155-65
PubMed ID: 9767584
|