Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2015
|
Name |
liuA
Synonym: ivd Synonym: gnyD |
Replicon | chromosome |
Genomic location | 2205190 - 2206353 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_250705.1 |
GI | 15597211 |
Affymetrix | PA2015_at |
DNASU | PaCD00006900 |
Entrez | 879167 |
GenBank | AAG05403.1 |
INSDC | AAG05403.1 |
NCBI Locus Tag | PA2015 |
protein_id(GenBank) | gb|AAG05403.1|AE004628_1|gnl|PseudoCAP|PA2015 |
TIGR | NTL03PA02015 |
UniParc | UPI00000C555B |
UniProtKB Acc | Q9I296 |
UniProtKB ID | Q9I296_PSEAE |
UniRef100 | UniRef100_U8N0I4 |
UniRef50 | UniRef50_Q92VK1 |
UniRef90 | UniRef90_Q02LG2 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative isovaleryl-CoA dehydrogenase
|
Synonyms |
Citronelloyl-CoA dehydrogenase, GnyD Ivd |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -5.67 |
Kyte-Doolittle Hydrophobicity Value | -0.132 |
Molecular Weight (kDa) | 42.2 |
Isoelectric Point (pI) | 5.49 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 484 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003424 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2015
Search term: liuA
Search term: putative isovaleryl-CoA dehydrogenase
|
Ensembl
110, assembly
GRCh38.p14
|
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value:
1.0e-137
Percent Identity:
64.0
|
Ensembl
110, assembly
GRCh38.p14
|
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value:
1.0e-137
Percent Identity:
64.0
|
The gnyRDBHAL cluster is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa.
Díaz-Pérez AL, Zavala-Hernández AN, Cervantes C, Campos-García J
Appl Environ Microbiol 2004 Sep;70(9):5102-10
PubMed ID: 15345388
|
Identification of genes and proteins necessary for catabolism of acyclic terpenes and leucine/isovalerate in Pseudomonas aeruginosa.
Förster-Fromme K, Höschle B, Mack C, Bott M, Armbruster W, Jendrossek D
Appl Environ Microbiol 2006 Jul;72(7):4819-28
PubMed ID: 16820476
|
Isolation of cDNA clones coding for rat isovaleryl-CoA dehydrogenase and assignment of the gene to human chromosome 15.
Kraus JP, Matsubara Y, Barton D, Yang-Feng TL, Glassberg R, Ito M, Ikeda Y, Mole J, Francke U, Tanaka K
Genomics 1987 Nov;1(3):264-9
PubMed ID: 3446585
|