Pseudomonas aeruginosa PAO1, PA2060 (sppC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA2060
Name
sppC
Replicon chromosome
Genomic location 2256704 - 2257720 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250750.1
GI 15597256
Affymetrix PA2060_at
DNASU PaCD00006918
Entrez 877849
GenBank AAG05448.1
INSDC AAG05448.1
NCBI Locus Tag PA2060
protein_id(GenBank) gb|AAG05448.1|AE004632_7|gnl|PseudoCAP|PA2060
TIGR NTL03PA02060
UniParc UPI00000C557D
UniProtKB Acc Q9I255
UniProtKB ID Q9I255_PSEAE
UniRef100 UniRef100_K1DUS7
UniRef50 UniRef50_P33915
UniRef90 UniRef90_V6AGP2

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease, SppC
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 5.62
Kyte-Doolittle Hydrophobicity Value 0.489
Molecular Weight (kDa) 37.4
Isoelectric Point (pI) 9.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003389 (298 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2060
Search term: sppC

Transposon Insertions in PAO1

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_37850
Mutant ID PA14NR: 37705
Genomic Position 3377173
Position in ORF 694(1017)
Reference 16477005

References

Identification of a second oligopeptide transport system in Bacillus subtilis and determination of its role in sporulation.
Koide A, Hoch JA.
Mol Microbiol. 1994 Aug;13(3):417-26.
PubMed ID: 7997159
Swarming motility is modulated by expression of the putative xenosiderophore transporter SppR-SppABCD in Pseudomonas aeruginosa PA14.
Pletzer D(1,)(2), Braun Y(3), Weingart H(3).
Antonie Van Leeuwenhoek. 2016 Jun;109(6):737-53.
PubMed ID: 26995781