Pseudomonas aeruginosa PAO1, PA2895 (sbrR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2895
Name
sbrR
Replicon chromosome
Genomic location 3249977 - 3250741 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_251585.1
GI 15598091
Affymetrix PA2895_at
Entrez 882601
GenBank AAG06283.1
INSDC AAG06283.1
NCBI Locus Tag PA2895
protein_id(GenBank) gb|AAG06283.1|AE004716_1|gnl|PseudoCAP|PA2895
TIGR NTL03PA02895
UniParc UPI00000C586A
UniProtKB Acc Q9HZV2
UniProtKB ID Q9HZV2_PSEAE
UniRef100 UniRef100_Q9HZV2
UniRef50 UniRef50_Q9HZV2
UniRef90 UniRef90_Q9HZV2

Product

Feature Type CDS
Coding Frame 1
Product Name
SbrR
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 5.20
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 10.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Virulence Evidence

Source 1
Database Victors : 4268
Category
Evidence ECO:0000315
mutant phenotype evidence used in manual assertion
Host Organism Rattus norvegicus
Notes
Infection model Rat agar bead model of chronic lung infection
Reference 14641575

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002678 (372 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2895
Search term: sbrR
Search term: SbrR

Human Homologs

References

σ Factor and Anti-σ Factor That Control Swarming Motility and Biofilm Formation in Pseudomonas aeruginosa.
McGuffie BA, Vallet-Gely I, Dove SL
J. Bacteriol. 2015 Nov;198(5):755-65
PubMed ID: 26620262