Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2896
|
Name |
sbrI
|
Replicon | chromosome |
Genomic location | 3250738 - 3251322 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_251586.1 |
GI | 15598092 |
Affymetrix | PA2896_at |
Entrez | 882789 |
GenBank | AAG06284.1 |
INSDC | AAG06284.1 |
NCBI Locus Tag | PA2896 |
protein_id(GenBank) | gb|AAG06284.1|AE004716_2|gnl|PseudoCAP|PA2896 |
TIGR | NTL03PA02896 |
UniParc | UPI00000C586B |
UniProtKB Acc | Q9HZV1 |
UniProtKB ID | Q9HZV1_PSEAE |
UniRef100 | UniRef100_W0YSR6 |
UniRef50 | UniRef50_Q4KKB3 |
UniRef90 | UniRef90_A6V3J5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
SbrI
|
Synonyms |
probable sigma-70 factor, ECF subfamily |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.59 |
Kyte-Doolittle Hydrophobicity Value | -0.676 |
Molecular Weight (kDa) | 22.3 |
Isoelectric Point (pI) | 6.52 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 482 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001286 (856 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2896
Search term: sbrI
Search term: SbrI
|
σ Factor and Anti-σ Factor That Control Swarming Motility and Biofilm Formation in Pseudomonas aeruginosa.
McGuffie BA, Vallet-Gely I, Dove SL
J. Bacteriol. 2015 Nov;198(5):755-65
PubMed ID: 26620262
|