Pseudomonas aeruginosa PAO1, PA3894

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3894
Name
Synonym: opmI
Replicon chromosome
Genomic location 4361494 - 4362984 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252583.1
GI 15599089
Affymetrix PA3894_at
Entrez 878791
GenBank AAG07281.1
INSDC AAG07281.1
NCBI Locus Tag PA3894
protein_id(GenBank) gb|AAG07281.1|AE004806_8|gnl|PseudoCAP|PA3894
TIGR NTL03PA03894
UniParc UPI00000C5B62
UniProtKB Acc Q9HXB9
UniProtKB ID Q9HXB9_PSEAE
UniRef100 UniRef100_K1DQC4
UniRef50 UniRef50_Q4KHZ9
UniRef90 UniRef90_V6A9Q5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable outer membrane protein precursor
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -4.33
Kyte-Doolittle Hydrophobicity Value -0.146
Molecular Weight (kDa) 53.5
Isoelectric Point (pI) 5.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 289 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001777 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3894

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295