Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4108
|
Name |
|
Replicon | chromosome |
Genomic location | 4591187 - 4592431 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_252797.1 |
GI | 15599303 |
Affymetrix | PA4108_at |
Entrez | 877982 |
GenBank | AAG07495.1 |
INSDC | AAG07495.1 |
NCBI Locus Tag | PA4108 |
protein_id(GenBank) | gb|AAG07495.1|AE004827_4|gnl|PseudoCAP|PA4108 |
TIGR | NTL03PA04108 |
UniParc | UPI00000C5C16 |
UniProtKB Acc | Q9HWS0 |
UniProtKB ID | Q9HWS0_PSEAE |
UniRef100 | UniRef100_Q9HWS0 |
UniRef50 | UniRef50_Q9HWS0 |
UniRef90 | UniRef90_Q9HWS0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
cyclic di-GMP phosphodiesterase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 3.71 |
Kyte-Doolittle Hydrophobicity Value | -0.014 |
Molecular Weight (kDa) | 45.4 |
Isoelectric Point (pI) | 7.91 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | PseudoCAP |
Category | |
Evidence |
ECO:0000314
direct assay evidence used in manual assertion
|
Host Organism | Galleria mellonella |
Notes | |
Infection model | Galleria mellonella killing assay |
Reference | 19170727 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 339 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001589 (414 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4108
Search term: cyclic di-GMP phosphodiesterase
|
HD-GYP domain proteins regulate biofilm formation and virulence in Pseudomonas aeruginosa.
Ryan RP, Lucey J, O'Donovan K, McCarthy Y, Yang L, Tolker-Nielsen T, Dow JM
Environ Microbiol 2009 May;11(5):1126-36
PubMed ID: 19170727
|