Pseudomonas aeruginosa PAO1, PA4184 (souR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4184
Name
souR
Replicon chromosome
Genomic location 4680092 - 4681114 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252873.1
GI 15599379
Affymetrix PA4184_at
DNASU PaCD00007819
Entrez 880296
GenBank AAG07571.1
INSDC AAG07571.1
NCBI Locus Tag PA4184
protein_id(GenBank) gb|AAG07571.1|AE004834_11|gnl|PseudoCAP|PA4184
TIGR NTL03PA04184
UniParc UPI00000C5C5D
UniProtKB Acc Q9HWJ7
UniProtKB ID Q9HWJ7_PSEAE
UniRef100 UniRef100_S0J7C3
UniRef50 UniRef50_I7B3J9
UniRef90 UniRef90_A6UZQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidation and utilization regulator SouR
Product Name Confidence: Class 1
Synonyms probable transcriptional regulator
Evidence for Translation
Charge (pH 7) 3.71
Kyte-Doolittle Hydrophobicity Value -0.069
Molecular Weight (kDa) 37.7
Isoelectric Point (pI) 8.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 367 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001516 (480 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4184
Search term: souR

Human Homologs

References

Sarcosine Catabolism in Pseudomonas aeruginosa Is Transcriptionally Regulated by SouR.
Willsey GG, Wargo MJ
J Bacteriol 2016 Jan 15;198(2):301-10
PubMed ID: 26503852