Pseudomonas aeruginosa PAO1, PA4332 (sadC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA4332
Name
sadC
Replicon chromosome
Genomic location 4860248 - 4861711 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253022
GI 15599528
Affymetrix PA4332_at
Entrez 881493
GenBank AAG07720.1
NCBI Locus Tag PA4332
protein_id(GenBank) gb|AAG07720.1|AE004849_7|gnl|PseudoCAP|PA4332
TIGR NTL03PA04333
UniProtKB Acc Q9HW69
UniProtKB ID Q9HW69_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
SadC
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 18.37
Kyte-Doolittle Hydrophobicity Value -0.030
Molecular Weight (kDa) 54.1
Isoelectric Point (pI) 9.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 1
green fluorescent protein fusion protein localization evidence
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4WXO TRANSFERASE 11/14/14 SadC (300-487) from Pseudomonas aeruginosa PAO1 PSEUDOMONAS AERUGINOSA PAO1 2.805 X-RAY DIFFRACTION 100.0
4WXW TRANSFERASE 11/14/14 SadC (323-487) from Pseudomonas aeruginosa PAO1 PSEUDOMONAS AERUGINOSA PAO1 1.8 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000167 (2894 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4332
Search term: sadC
Search term: SadC

Transposon Insertions in PAO1

Type ISlacZ/hah insertion site
Mutant ID UWGC: 19370
Genomic Position 4860639
Position in ORF 392(1464)
Reference 14617778
Type Confirmed ISphoA/hah insertion site
Mutant ID UWGC: 32422
Genomic Position 4861065
Position in ORF 818(1464)
Reference 14617778
Type mini-Tn5 lux transposon insertion site (Non-transcriptional fusion)
Mutant ID UBC: PAO1_lux_17_G10
Genomic Position 4860819
Position in ORF 572(1464)
Reference 15805499

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_56280
Mutant ID PA14NR: 26451
Genomic Position 5024592
Position in ORF 794(1128)
Reference 16477005

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE.
Genome Res. 2005 Feb;15(2):321-9.
PubMed ID: 15687295
The Diguanylate Cyclase SadC Is a Central Player in Gac/Rsm-Mediated Biofilm Formation in Pseudomonas aeruginosa.
Moscoso JA(1), Jaeger T(2), Valentini M(1), Hui K(1), Jenal U(2), Filloux A(3).
J Bacteriol. 2014 Dec 1;196(23):4081-8.
PubMed ID: 25225264
Specific control of Pseudomonas aeruginosa surface-associated behaviors by two c-di-GMP diguanylate cyclases.
Merritt JH(1), Ha DG, Cowles KN, Lu W, Morales DK, Rabinowitz J, Gitai Z, O'Toole GA.
MBio. 2010 Oct 19;1(4). pii: e00183-10.
PubMed ID: 20978535
SadC reciprocally influences biofilm formation and swarming motility via modulation of exopolysaccharide production and flagellar function.
Merritt JH(1), Brothers KM, Kuchma SL, O'Toole GA.
J Bacteriol. 2007 Nov;189(22):8154-64.
PubMed ID: 17586642
Synergistic interaction of glyceraldehydes-3-phosphate dehydrogenase and ArsJ, a novel organoarsenical efflux permease, confers arsenate resistance.
Chen J(1), Yoshinaga M(1), Garbinski LD(1), Rosen BP(1).
Mol Microbiol. 2016 Jun;100(6):945-53.
PubMed ID: 26991003