Pseudomonas aeruginosa PAO1, PA4834

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA4834
Name
Replicon chromosome
Genomic location 5424761 - 5425615 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253521.1
GI 15600027
Affymetrix PA4834_at
DNASU PaCD00008099
Entrez 882351
GenBank AAG08219.1
INSDC AAG08219.1
NCBI Locus Tag PA4834
protein_id(GenBank) gb|AAG08219.1|AE004896_9|gnl|PseudoCAP|PA4834
TIGR NTL03PA04835
UniParc UPI00000C5E2F
UniProtKB Acc Q9HUX6
UniProtKB ID Q9HUX6_PSEAE
UniRef100 UniRef100_Q9HUX6
UniRef50 UniRef50_Q9HUX6
UniRef90 UniRef90_Q9HUX6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative nicotianamine synthase
Product Name Confidence: Class 2
Evidence for Translation
Charge (pH 7) 7.12
Kyte-Doolittle Hydrophobicity Value 1.163
Molecular Weight (kDa) 30.7
Isoelectric Point (pI) 9.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004465 (307 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4834

Transposon Insertions in PAO1

Type Confirmed ISlacZ/hah insertion site
Mutant ID UWGC: 16874
Genomic Position 5425382
Position in ORF 622(855)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 49509
Genomic Position 5425014
Position in ORF 254(855)
Reference 14617778

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_63910
Mutant ID PA14NR: 53593
Genomic Position 5695886
Position in ORF 485(855)
Reference 16477005

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE.
Genome Res. 2005 Feb;15(2):321-9.
PubMed ID: 15687295
A novel siderophore system is essential for the growth of Pseudomonas aeruginosa in airway mucus.
Gi M(1), Lee KM(2), Kim SC(1), Yoon JH(1), Yoon SS(2,)(3), Choi JY(1).
Sci Rep. 2015 Oct 8;5:14644.
PubMed ID: 26446565