Pseudomonas aeruginosa PAO1, PA4906

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4906
Name
Synonym: vanR
Replicon chromosome
Genomic location 5505071 - 5505784 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_253593.1
GI 15600099
Affymetrix PA4906_at
DNASU PaCD00008123
Entrez 878001
GenBank AAG08291.1
INSDC AAG08291.1
NCBI Locus Tag PA4906
protein_id(GenBank) gb|AAG08291.1|AE004903_9|gnl|PseudoCAP|PA4906
TIGR NTL03PA04907
UniParc UPI00000C5E70
UniProtKB Acc Q9HUQ7
UniProtKB ID Q9HUQ7_PSEAE
UniRef100 UniRef100_W0YRK2
UniRef50 UniRef50_Q4KB07
UniRef90 UniRef90_A0A077JXP5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms vanR transcriptional regulator
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -0.37
Kyte-Doolittle Hydrophobicity Value -0.218
Molecular Weight (kDa) 26.1
Isoelectric Point (pI) 6.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 309 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001218 (1274 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4906

Human Homologs

References

No references are associated with this feature.