Pseudomonas aeruginosa PAO1, PA4916 (nrtR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA4916
Name
nrtR
Replicon chromosome
Genomic location 5516399 - 5517094 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_253603.1
GI 15600109
Affymetrix PA4916_at
DNASU PaCD00008126
Entrez 878462
GenBank AAG08301.1
INSDC AAG08301.1
NCBI Locus Tag PA4916
protein_id(GenBank) gb|AAG08301.1|AE004904_9|gnl|PseudoCAP|PA4916
TIGR NTL03PA04917
UniParc UPI00000C5E7A
UniProtKB Acc Q9HUP7
UniProtKB ID Q9HUP7_PSEAE
UniRef100 UniRef100_Q9HUP7
UniRef50 UniRef50_T2H7I0
UniRef90 UniRef90_Q9HUP7

Product

Feature Type CDS
Coding Frame 1
Product Name
Nudix-related transcriptional regulator NrtR
Product Name Confidence: Class 1
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -1.62
Kyte-Doolittle Hydrophobicity Value -0.084
Molecular Weight (kDa) 25.5
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 223 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004534 (391 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4916
Search term: nrtR

Transposon Insertions in PAO1

Type ISphoA/hah insertion site
Mutant ID UWGC: 53004
Genomic Position 5516802
Position in ORF 404(696)
Reference 14617778
Type Confirmed ISphoA/hah insertion site
Mutant ID UWGC: 50647
Genomic Position 5516561
Position in ORF 163(696)
Reference 14617778

Transposon Insertions in Orthologs

References

No references are associated with this feature.