Pseudomonas aeruginosa PAO1, PA5001 (ssg)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5001
Name
ssg
Replicon chromosome
Genomic location 5618579 - 5619535 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253688.1
GI 15600194
Affymetrix PA5001_at
Entrez 881665
GenBank AAG08386.1
INSDC AAG08386.1
NCBI Locus Tag PA5001
protein_id(GenBank) gb|AAG08386.1|AE004913_1|gnl|PseudoCAP|PA5001
TIGR NTL03PA05002
UniParc UPI00000C5EBE
UniProtKB Acc Q9HUG4
UniProtKB ID Q9HUG4_PSEAE
UniRef100 UniRef100_W0YZ92
UniRef50 UniRef50_A0A022NXF1
UniRef90 UniRef90_A0A022NXF1

Product

Feature Type CDS
Coding Frame 1
Product Name
cell surface-sugar biosynthetic glycosyltransferase, Ssg
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 5.30
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 36.6
Isoelectric Point (pI) 8.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004609 (436 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5001
Search term: ssg

Human Homologs

References

Ssg, a putative glycosyltransferase, functions in lipo- and exopolysaccharide biosynthesis and cell surface-related properties in Pseudomonas alkylphenolia.
Veeranagouda Y, Lee K, Cho AR, Cho K, Anderson EM, Lam JS
FEMS Microbiol Lett 2011 Feb;315(1):38-45
PubMed ID: 21166709