Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5065
|
Name |
ubiB
Synonym: yigR Synonym: aarF |
Replicon | chromosome |
Genomic location | 5704077 - 5705678 (+ strand) |
RefSeq | NP_253752.1 |
GI | 15600258 |
Affymetrix | PA5065_at |
Entrez | 878018 |
GenBank | AAG08450.1 |
INSDC | AAG08450.1 |
NCBI Locus Tag | PA5065 |
protein_id(GenBank) | gb|AAG08450.1|AE004919_11|gnl|PseudoCAP|PA5065 |
TIGR | NTL03PA05066 |
UniParc | UPI0000137989 |
UniProtKB Acc | Q9HUB8 |
UniProtKB ID | UBIB_PSEAE |
UniRef100 | UniRef100_Q9HUB8 |
UniRef50 | UniRef50_O07443 |
UniRef90 | UniRef90_Q9HUB8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ubiquinone biosynthetic protein UbiB
|
Synonyms | |
Evidence for Translation |
Detected using LC-MS/MS (61.72 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 8.11 |
Kyte-Doolittle Hydrophobicity Value | -0.129 |
Molecular Weight (kDa) | 61.7 |
Isoelectric Point (pI) | 9.44 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004666 (537 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5065
Search term: ubiB
Search term: ubiquinone biosynthetic protein UbiB
|
Ensembl
110, assembly
GRCh38.p14
|
aarF domain containing kinase 5 [Source:HGNC Symbol;Acc:HGNC:21738]
E-value:
2.2e-29
Percent Identity:
31.0
|
Ensembl
110, assembly
GRCh38.p14
|
aarF domain containing kinase 5 [Source:HGNC Symbol;Acc:HGNC:21738]
E-value:
2.2e-29
Percent Identity:
31.0
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Identification of Escherichia coli ubiB, a gene required for the first monooxygenase step in ubiquinone biosynthesis.
Poon WW, Davis DE, Ha HT, Jonassen T, Rather PN, Clarke CF
J Bacteriol 2000 Sep;182(18):5139-46
PubMed ID: 10960098
|
Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii.
Macinga DR, Cook GM, Poole RK, Rather PN
J Bacteriol 1998 Jan;180(1):128-35
PubMed ID: 9422602
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|