Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5167
|
Name |
dctP
|
Replicon | chromosome |
Genomic location | 5817191 - 5818186 (+ strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
Comment | Structural similarity to 4MX6 (TRAP periplasmic solute binding protein from Shewanella oneidensis, root-mean-square deviation: 0.5 angstroms). Sequence similarity to 4O94 (98%/60,07%) (SIN). Final predicted ligand: succinic acid (PMID: 31631799) |
RefSeq | NP_253854.1 |
GI | 15600360 |
Affymetrix | PA5167_at |
DNASU | PaCD00008221 |
Entrez | 879964 |
GenBank | AAG08552.1 |
INSDC | AAG08552.1 |
NCBI Locus Tag | PA5167 |
protein_id(GenBank) | gb|AAG08552.1|AE004929_7|gnl|PseudoCAP|PA5167 |
TIGR | NTL03PA05168 |
UniParc | UPI00000C5F34 |
UniProtKB Acc | Q9HU18 |
UniProtKB ID | Q9HU18_PSEAE |
UniRef100 | UniRef100_W0Z150 |
UniRef50 | UniRef50_A3QCW5 |
UniRef90 | UniRef90_V6AP12 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DctP
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | 3.42 |
Kyte-Doolittle Hydrophobicity Value | -0.361 |
Molecular Weight (kDa) | 37.1 |
Isoelectric Point (pI) | 8.84 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 257 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000851 (1023 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5167
Search term: dctP
Search term: DctP
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Purification, characterization and nucleotide sequence of the periplasmic C4-dicarboxylate-binding protein (DctP) from Rhodobacter capsulatus.
Shaw JG, Hamblin MJ, Kelly DJ
Mol Microbiol 1991 Dec;5(12):3055-62
PubMed ID: 1809844
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Identification of C(4)-dicarboxylate transport systems in Pseudomonas aeruginosa PAO1.
Valentini M, Storelli N, Lapouge K
J Bacteriol 2011 Sep;193(17):4307-16
PubMed ID: 21725012
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|