Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5327
|
Name |
sphC
|
Replicon | chromosome |
Genomic location | 5998348 - 5999676 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_254014.1 |
GI | 15600520 |
Affymetrix | PA5327_at |
Entrez | 878250 |
GenBank | AAG08712.1 |
INSDC | AAG08712.1 |
NCBI Locus Tag | PA5327 |
protein_id(GenBank) | gb|AAG08712.1|AE004945_6|gnl|PseudoCAP|PA5327 |
TIGR | NTL03PA05328 |
UniParc | UPI00000C5FA8 |
UniProtKB Acc | Q9HTM8 |
UniProtKB ID | Q9HTM8_PSEAE |
UniRef100 | UniRef100_Q9HTM8 |
UniRef50 | UniRef50_Q4KAC2 |
UniRef90 | UniRef90_Q9HTM8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
SphC
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.50 |
Kyte-Doolittle Hydrophobicity Value | -0.276 |
Molecular Weight (kDa) | 49.4 |
Isoelectric Point (pI) | 6.68 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | Victors : 4218 |
Category | |
Evidence |
ECO:0000315
mutant phenotype evidence used in manual assertion
|
Host Organism | Rattus norvegicus |
Notes | |
Infection model | Rat agar bead model of chronic lung infection |
Reference | 14641575 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 130 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004896 (350 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5327
Search term: sphC
Search term: SphC
|
Detection of host-derived sphingosine by Pseudomonas aeruginosa is important for survival in the murine lung.
LaBauve AE, Wargo MJ
PLoS Pathog 2014 Jan;10(1):e1003889
PubMed ID: 24465209
|