Pseudomonas fluorescens Pf0-1, Pfl01_1058 (wspR)

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_1058
Name	wspR
Replicon	chromosome
Genomic location	1226630 - 1227631 (+ strand)

Cross-References

RefSeq	YP_346790.1
GI	77457285
Entrez	3716207
INSDC	ABA72801.1
NCBI Locus Tag	Pfl01_1058
UniParc	UPI000038884A
UniProtKB Acc	Q3KHF5
UniProtKB ID	Q3KHF5_PSEPF
UniRef100	UniRef100_Q3KHF5
UniRef50	UniRef50_E2XMM0
UniRef90	UniRef90_Q3KHF5

Product

Feature Type	CDS
Coding Frame	1
Product Name	WspR Product Name Confidence: Class 1
Synonyms	response regulator receiver modulated diguanylate cyclase
Evidence for Translation
Charge (pH 7)	-6.13
Kyte-Doolittle Hydrophobicity Value	-0.220
Molecular Weight (kDa)	36902.5
Isoelectric Point (pI)	5.65

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000167 (2758 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_1058 Search term: wspR Search term: WspR

Human Homologs

References

Systematic analysis of diguanylate cyclases that promote biofilm formation by Pseudomonas fluorescens Pf0-1. Newell PD, Yoshioka S, Hvorecny KL, Monds RD, O'Toole GA J Bacteriol 2011 Sep;193(18):4685-98 PubMed ID: 21764921