Pseudomonas aeruginosa UCBPP-PA14, PA14_02980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_02980
Name
Replicon chromosome
Genomic location 260374 - 261639 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 8 transposon mutants in orthologs

Cross-References

RefSeq YP_788391.1
GI 116053953
Entrez 4383651
INSDC ABJ15189.1
NCBI Locus Tag PA14_02980
UniParc UPI000045D3B6
UniProtKB Acc Q02UJ5
UniProtKB ID Q02UJ5_PSEAB
UniRef100 UniRef100_S0I5Z3
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_A6UY35

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) 3.83
Kyte-Doolittle Hydrophobicity Value -0.446
Molecular Weight (kDa) 46.1
Isoelectric Point (pI) 8.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4FMS TRANSPORT PROTEIN 06/18/12 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate PSEUDOMONAS AERUGINOSA 2.45 X-RAY DIFFRACTION 99.5
3SZD MEMBRANE PROTEIN 07/18/11 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) PSEUDOMONAS AERUGINOSA 2.311 X-RAY DIFFRACTION 99.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 15 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1183 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_02980
Search term: porin

References

No references are associated with this feature.