Pseudomonas aeruginosa UCBPP-PA14, PA14_64720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_64720
Name
Replicon chromosome
Genomic location 5765866 - 5767119 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 8 transposon mutants in orthologs

Cross-References

RefSeq YP_793366.1
GI 116053047
Entrez 4384821
INSDC ABJ14283.1
NCBI Locus Tag PA14_64720
UniParc UPI0000E44C40
UniProtKB Acc Q02FC0
UniProtKB ID Q02FC0_PSEAB
UniRef100 UniRef100_S0HFC8
UniRef50 UniRef50_Q9HUR5
UniRef90 UniRef90_Q9HUR5

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -0.10
Kyte-Doolittle Hydrophobicity Value -0.375
Molecular Weight (kDa) 45.8
Isoelectric Point (pI) 6.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Y2X MEMBRANE PROTEIN 12/16/10 Crystal Structure of Pseudomonas Aeruginosa OpdK with Vanillate PSEUDOMONAS AERUGINOSA PA01 1.65 X-RAY DIFFRACTION 98.7
2QTK MEMBRANE PROTEIN 08/02/07 Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.8 X-RAY DIFFRACTION 98.7
3SYS MEMBRANE PROTEIN 07/18/11 Improved crystal structure of Pseudomonas aeruginosa OccK1 (OpdK) Pseudomonas aeruginosa 1.65 X-RAY DIFFRACTION 98.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 20 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_64720
Search term: porin

Human Homologs

References

No references are associated with this feature.