Pseudomonas aeruginosa PA7, PSPA7_4249

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4249
Name
Replicon chromosome
Genomic location 4385335 - 4386639 (+ strand)

Cross-References

RefSeq YP_001349603.1
GI 152985451
Entrez 5355539
INSDC ABR82634.1
NCBI Locus Tag PSPA7_4249
UniParc UPI0000D72CD5
UniProtKB Acc A6V968
UniProtKB ID A6V968_PSEA7
UniRef100 UniRef100_A6V968
UniRef50 UniRef50_G8Q662
UniRef90 UniRef90_W0YL25

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.89
Kyte-Doolittle Hydrophobicity Value -0.064
Molecular Weight (kDa) 47638.8
Isoelectric Point (pI) 6.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4IOB LYASE 01/07/13 Crystal structure of the GGDEF domain of PA1120 (YfiN or TpbB) from Pseudomonas aeruginosa at 2.7 Ang. Pseudomonas aeruginosa 2.78 X-RAY DIFFRACTION 95.0
7A7E LIGASE 08/28/20 Structure of a delta-N mutant - E232start - of PA1120 (TpbB or YfiN) from Pseudomonas aeruginosa (PAO1) comprising only the GGDEF domain Pseudomonas aeruginosa PAO1 2.8 X-RAY DIFFRACTION 93.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 457 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001080 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4249

Human Homologs

References

No references are associated with this feature.