Pseudomonas syringae pv. tomato DC3000, PSPTO_4174 (aatP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4174
NCBI Old Locus TagPSPTO4174
Name
aatP
Synonym: PSPTO4174
Replicon chromosome
Genomic location 4702042 - 4702776 (+ strand)

Cross-References

RefSeq NP_793935.1
GI 28871316
Entrez 1185854
INSDC AAO57630.1
NCBI Locus Tag PSPTO_4174
NCBI Old Locus Tag PSPTO4174
UniParc UPI0000009205
UniProtKB Acc Q87XK4
UniProtKB ID Q87XK4_PSESM
UniRef100 UniRef100_Q87XK4
UniRef50 UniRef50_Q9HZS1
UniRef90 UniRef90_F6AAB2

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter ATP-binding protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -2.23
Kyte-Doolittle Hydrophobicity Value -0.042
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001274 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4174
Search term: aatP

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 5.1e-18
Percent Identity: 28.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 5.1e-18
Percent Identity: 28.9

References

Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.
Singh B, Röhm KH
Microbiology (Reading) 2008 Mar;154(Pt 3):797-809
PubMed ID: 18310026