Pseudomonas syringae pv. tomato DC3000, PSPTO_4175 (aauS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4175
NCBI Old Locus TagPSPTO4175
Name
aauS
Synonym: PSPTO4175
Replicon chromosome
Genomic location 4702835 - 4704766 (+ strand)

Cross-References

RefSeq NP_793936.1
GI 28871317
Entrez 1185855
INSDC AAO57631.1
NCBI Locus Tag PSPTO_4175
NCBI Old Locus Tag PSPTO4175
UniParc UPI0000009206
UniProtKB Acc Q87XK3
UniProtKB ID Q87XK3_PSESM
UniRef100 UniRef100_Q87XK3
UniRef50 UniRef50_Q4K727
UniRef90 UniRef90_Q48EZ4

Product

Feature Type CDS
Coding Frame 1
Product Name
sensor histidine kinase
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 3.87
Kyte-Doolittle Hydrophobicity Value -0.258
Molecular Weight (kDa) 71.3
Isoelectric Point (pI) 8.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001272 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4175
Search term: aauS

Human Homologs

References

Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system.
Singh B, Röhm KH
Microbiology (Reading) 2008 Mar;154(Pt 3):797-809
PubMed ID: 18310026