Pseudomonas aeruginosa PAO1, PA3865.1
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
| Locus Tag |
PA3865.1
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4327359 - 4327697 (- strand) |
| Comment | Originally characterized using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer. Confirmed using RT-PCR (PMID:24291602). |
Cross-References
| RefSeq | |
| GI |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
pyocin S4 immunity protein
|
| Synonyms | |
| Evidence for Translation |
Translation confirmed using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
| Charge (pH 7) | -1.53 |
| Kyte-Doolittle Hydrophobicity Value | -0.172 |
| Molecular Weight (kDa) | 12.3 |
| Isoelectric Point (pI) | 5.75 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG008414 (3 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA3865.1
Search term: pyocin S4 immunity protein
|
Human Homologs
References
|
The soluble pyocins S2 and S4 from Pseudomonas aeruginosa bind to the same FpvAI receptor.
Elfarash A, Wei Q, Cornelis P
Microbiologyopen 2012 Sep;1(3):268-75
PubMed ID: 23170226
|
|
LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames.
Kumari H, Murugapiran SK, Balasubramanian D, Schneper L, Merighi M, Sarracino D, Lory S, Mathee K
J Proteomics 2014 Jan 16;96:328-342
PubMed ID: 24291602
|