Pseudomonas aeruginosa LESB58, PALES_12231 (nagR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_12231
Name
nagR
Replicon chromosome
Genomic location 1329354 - 1330097 (- strand)

Cross-References

RefSeq YP_002438829
GI 218889965
Entrez 7176036

Product

Feature Type CDS
Coding Frame 1
Product Name
Transcriptional regulator of N-Acetylglucosamine catabolism operon
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 0.93
Kyte-Doolittle Hydrophobicity Value -0.231
Molecular Weight (kDa) 27.5
Isoelectric Point (pI) 7.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 380 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001925 (1146 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_12231
Search term: nagR

Human Homologs

References

Pseudomonas aeruginosa enhances production of an antimicrobial in response to N-acetylglucosamine and peptidoglycan.
Korgaonkar AK, Whiteley M
J Bacteriol 2011 Feb;193(4):909-17
PubMed ID: 21169497